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environment.yml
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environment.yml
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name: crispr_identify_env
channels:
- anaconda
- conda-forge
- bioconda
- defaults
- biobuilds
- bioconda/label/cf201901
- r
dependencies:
- anaconda::_tflow_select=2.3.0
- biopython=1.76
- h5py=2.10.0
- hdf5=1.10.6
- hmmer=3.3
- numpy=1.18.1
- pandas=1.0.3
- matplotlib=3.1.3
- perl=5.26.2
- perl-compress-bgzf=0.005
- perl-threaded=5.26.0
- perl-yaml=1.29
- prodigal=2.6.3
- dill=0.3.3
- protobuf=3.13.0.1
- regex=2019.03.09
- pyasn1=0.4.8
- pycparser=2.20
- networkx=2.5
- pyjwt=1.7.1
- pyparsing=2.4.7
- pyqt=5.9.2
- pysocks=1.7.1
- python-dateutil=2.8.1
- python_abi=3.7
- pytz=2020.1
- pyyaml=5.3.1
- scikit-learn=0.22.1
- scipy=1.4.1
- anaconda::tensorboard=2.3.0
- anaconda::tensorboard-plugin-wit=1.6.0
- viennarna=2.4.15
- pyopenssl=22.0.0
- certifi=2022.12.7
- vmatch=2.3.0
- clustalo=1.2.3
- blast=2.5.0
- numpy=1.18.1
- keras=2.4.3
- anaconda::tensorflow=2.3.0
- libffi=3.3